STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0431Iron (III) ABC transporter, permease protein (hemU-1); Similar to GB:X77867 PID:541768 PID:1619624 percent identity: 36.22; identified by sequence similarity; putative. (334 aa)    
Predicted Functional Partners:
AF_0430
Iron (III) ABC transporter, ATP-binding protein (hemV-1); Similar to GB:L77117 SP:Q57554 PID:1498853 percent identity: 50.40; identified by sequence similarity; putative.
 
 0.998
AF_0432
Iron (III) ABC transporter, ATP-binding protein (hemV-2); Similar to GB:L77117 SP:Q57550 PID:1590868 percent identity: 58.71; identified by sequence similarity; putative.
 
 
 0.989
AF_1401
Iron (III) ABC transporter, ATP-binding protein (hemV-3); Similar to GB:L77117 PID:1591556 percent identity: 35.19; identified by sequence similarity; putative.
 
 0.966
AF_0433
Conserved hypothetical protein; Similar to GB:D15061 SP:P28634 PID:303558 GB:U00096 PID:1552771 percent identity: 39.61; identified by sequence similarity; putative.
  
    0.938
cbiHC
Cobalamin biosynthesis precorrin-3 methylase (cbiH); Bifunctional enzyme with a methyltransferase domain that catalyzes the ring contraction and methylation of C-17 in cobalt-factor III to form cobalt-factor IV, and an isomerase domain that catalyzes the conversion of cobalt-precorrin-8 to cobyrinate; In the C-terminal section; belongs to the CobH family.
  
  
 0.868
AF_0429
Methyltransferase; Similar to GB:L77117 SP:Q57551 PID:1498850 percent identity: 43.84; identified by sequence similarity; putative.
 
    0.813
AF_0241
Conserved hypothetical protein; Similar to GB:L77117 PID:1500478 percent identity: 43.14; identified by sequence similarity; putative.
       0.624
AF_0434
3-hydroxyacyl-CoA dehydrogenase (hbd-3); Similar to GB:M31799 PID:144733 percent identity: 40.73; identified by sequence similarity; putative.
       0.501
AF_0435
enoyl-CoA hydratase (fad-1); Similar to PID:755067 percent identity: 47.64; identified by sequence similarity; putative; Belongs to the enoyl-CoA hydratase/isomerase family.
       0.501
AF_0436
acyl-CoA dehydrogenase (acd-2); Similar to SP:P45867 PID:853760 GB:AL009126 percent identity: 44.06; identified by sequence similarity; putative.
       0.501
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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