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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0504Conserved hypothetical protein; Similar to GB:L77117 PID:1500528 percent identity: 43.59; identified by sequence similarity; putative; Belongs to the UPF0282 family. (301 aa)    
Predicted Functional Partners:
AF_1068
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57659 PID:1498981 percent identity: 50.38; identified by sequence similarity; putative.
  
   
 0.586
AF_0505
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58982 PID:1500483 percent identity: 36.09; identified by sequence similarity; putative.
       0.571
AF_0792
Predicted coding region AF_0792; Hypothetical protein; identified by GeneMark; putative.
 
     0.555
nep1
Conserved hypothetical protein; Methyltransferase involved in ribosomal biogenesis. Specifically catalyzes the N1-methylation of the pseudouridine corresponding to position 914 in M.jannaschii 16S rRNA.
 
     0.517
AF_0660
Conserved hypothetical protein; Similar to SP:P42979 PID:755602 PID:1146233 GB:AL009126 percent identity: 45.10; identified by sequence similarity; putative.
  
     0.494
AF_0820
Predicted coding region AF_0820; Hypothetical protein; identified by GeneMark; putative.
  
     0.435
AF_2049
Conserved hypothetical protein; Similar to GB:L77117 PID:1591954 percent identity: 31.36; identified by sequence similarity; putative.
  
     0.407
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.