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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0518Conserved hypothetical protein; Similar to GB:L77117 PID:1592003 percent identity: 34.55; identified by sequence similarity; putative. (236 aa)    
Predicted Functional Partners:
AF_0519
Predicted coding region AF_0519; Hypothetical protein; identified by GeneMark; putative.
       0.813
aroK
Conserved hypothetical protein; Similar to GB:L77117 PID:1500322 percent identity: 34.44; identified by sequence similarity; putative.
       0.773
AF_0775
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 23.83; identified by sequence similarity; putative.
  
     0.680
AF_1443
Conserved hypothetical protein; Similar to GB:L77117 PID:1592003 percent identity: 40.93; identified by sequence similarity; putative.
  
     0.674
AF_0517
Cell division control protein 21 (cdc21); Similar to GB:L77117 SP:Q57809 PID:1591071 percent identity: 32.75; identified by sequence similarity; putative; Belongs to the MCM family.
       0.634
AF_0516
Predicted coding region AF_0516; Hypothetical protein; identified by GeneMark; putative.
       0.542
AF_1484
Predicted coding region AF_1484; Hypothetical protein; identified by GeneMark; putative.
  
     0.522
AF_0514
Predicted coding region AF_0514; Hypothetical protein; identified by GeneMark; putative.
       0.407
AF_0515
NADH oxidase, putative; Similar to GB:D21803 PID:464216 percent identity: 25.53; identified by sequence similarity; putative.
       0.405
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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