Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0558Conserved hypothetical protein; Similar to GP:1934608 percent identity: 24.44; identified by sequence similarity; putative. (137 aa)    
Predicted Functional Partners:
AF_0557
Flavoprotein reductase; Similar to GP:1480407 percent identity: 26.19; identified by sequence similarity; putative.
  
    0.877
AF_0556
Conserved hypothetical protein; Similar to SP:P54436 PID:1303708 GB:AL009126 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the sulfur carrier protein TusA family.
       0.777
AF_0555
Predicted coding region AF_0555; Hypothetical protein; identified by GeneMark; putative.
       0.719
AF_1381
F420-nonreducing hydrogenase (vhtG); Similar to PID:602582 percent identity: 46.11; identified by sequence similarity; putative.
   
   0.679
AF_0559
Conserved hypothetical protein; Similar to PID:1652988 percent identity: 38.22; identified by sequence similarity; putative.
  
    0.609
AF_0554
Conserved hypothetical protein; Similar to SP:P33014 GB:U00009 PID:405955 GB:U00096 PID:1788322 percent identity: 37.68; identified by sequence similarity; putative; Belongs to the sulfur carrier protein TusA family.
       0.486
AF_0254
NADH oxidase (noxA-1); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 35.14; identified by sequence similarity; putative.
  
    0.477
AF_0273
Sarcosine oxidase, subunit alpha (soxA); Similar to PID:927591 SP:Q46337 percent identity: 31.11; identified by sequence similarity; putative.
  
    0.477
AF_0395
NADH oxidase (noxA-2); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 35.45; identified by sequence similarity; putative.
  
    0.477
AF_0400
NADH oxidase (noxA-3); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 40.85; identified by sequence similarity; putative.
  
    0.477
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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