STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0558Conserved hypothetical protein; Similar to GP:1934608 percent identity: 24.44; identified by sequence similarity; putative. (137 aa)    
Predicted Functional Partners:
AF_0557
Flavoprotein reductase; Similar to GP:1480407 percent identity: 26.19; identified by sequence similarity; putative.
  
    0.865
AF_1381
F420-nonreducing hydrogenase (vhtG); Similar to PID:602582 percent identity: 46.11; identified by sequence similarity; putative.
   
 
 0.782
AF_0556
Conserved hypothetical protein; Similar to SP:P54436 PID:1303708 GB:AL009126 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the sulfur carrier protein TusA family.
       0.778
AF_0555
Predicted coding region AF_0555; Hypothetical protein; identified by GeneMark; putative.
       0.721
AF_1372
Methylviologen-reducing hydrogenase, subunit alpha (vhuA); Similar to GB:L77117 PID:1591820 percent identity: 39.40; identified by sequence similarity; putative.
   
 
 0.681
AF_1380
F420-nonreducing hydrogenase (vhtA); Similar to PID:602583 percent identity: 34.82; identified by sequence similarity; putative.
   
 
 0.681
AF_0559
Conserved hypothetical protein; Similar to PID:1652988 percent identity: 38.22; identified by sequence similarity; putative.
  
    0.613
AF_0553
Thiamine biosynthesis protein (thiF); Similar to SP:P30138 PID:396331 PID:414234 GB:U00096 PID:1790425 percent identity: 38.75; identified by sequence similarity; putative.
  
    0.519
AF_0552
Conserved hypothetical protein; Similar to PID:1653220 percent identity: 37.08; identified by sequence similarity; putative; Belongs to the sulfur carrier protein CysO family.
  
    0.495
AF_0554
Conserved hypothetical protein; Similar to SP:P33014 GB:U00009 PID:405955 GB:U00096 PID:1788322 percent identity: 37.68; identified by sequence similarity; putative; Belongs to the sulfur carrier protein TusA family.
       0.488
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.