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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0572Conserved hypothetical protein; Similar to GB:L77117 SP:Q57900 PID:1499252 percent identity: 34.36; identified by sequence similarity; putative. (202 aa)    
Predicted Functional Partners:
AF_0479
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58250 PID:1591527 percent identity: 41.38; identified by sequence similarity; putative.
 
  
 0.989
ef1b
Translation elongation factor EF-1, subunit beta; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.
       0.865
mfnB
Conserved hypothetical protein; Catalyzes the formation of 4-(hydroxymethyl)-2- furancarboxaldehyde phosphate (4-HFC-P) from two molecules of glyceraldehyde-3-P (GA-3-P).
 
   
 0.849
AF_0573
Predicted coding region AF_0573; Hypothetical protein; identified by GeneMark; putative.
       0.847
AF_1061
Conserved hypothetical protein; Similar to GB:L77117 PID:1591504 percent identity: 42.64; identified by sequence similarity; putative.
 
   
 0.847
AF_1414
Dihydropteroate synthase; Similar to GB:L77117 SP:Q57571 PID:1590884 percent identity: 40.82; identified by sequence similarity; putative.
 
   
 0.831
AF_0713
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA-1); Similar to GB:L77117 SP:Q58114 PID:1591418 percent identity: 37.50; identified by sequence similarity; putative; Belongs to the HisA/HisF family.
 
   
 0.801
AF_0575
Conserved hypothetical protein; Similar to SP:P54501 PID:1303871 GB:AL009126 percent identity: 33.86; identified by sequence similarity; putative.
       0.766
AF_1930
Tungsten formylmethanofuran dehydrogenase, subunit A (fwdA); Similar to GB:L77117 PID:1591795 percent identity: 48.91; identified by sequence similarity; putative.
 
   
 0.757
AF_0576
Predicted coding region AF_0576; Hypothetical protein; identified by GeneMark; putative.
       0.746
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.