Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0578Aminopeptidase, putative; Similar to GB:X73124 SP:P25152 GB:X52480 PID:40243 PID:413932 percent identity: 27.76; identified by sequence similarity; putative. (384 aa)    
Predicted Functional Partners:
AF_0646
Agmatinase (speB); Similar to GB:M32363 SP:P16936 PID:147859 PID:551839 PID:882466 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the arginase family.
  
 
 0.701
AF_0583
Predicted coding region AF_0583; Hypothetical protein; identified by GeneMark; putative.
 
     0.628
AF_0582
Predicted coding region AF_0582; Hypothetical protein; identified by GeneMark; putative.
 
     0.626
AF_0579
Predicted coding region AF_0579; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.624
AF_1180
Predicted coding region AF_1180; Hypothetical protein; identified by GeneMark; putative.
    
 0.525
atpA
H+-transporting ATP synthase, subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family.
   
 0.509
AF_0580
Exodeoxyribonuclease III (xthA); Similar to PID:1653682 percent identity: 41.31; identified by sequence similarity; putative.
     
 0.490
atpB
H+-transporting ATP synthase, subunit B (atpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
 0.480
atpI
H+-transporting ATP synthase, subunit I (atpI); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family.
   
 0.477
AF_0584
Transcriptional regulatory protein, AsnC family; Similar to GB:L77117 SP:Q58133 PID:1591440 percent identity: 35.25; identified by sequence similarity; putative.
       0.475
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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