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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0583Predicted coding region AF_0583; Hypothetical protein; identified by GeneMark; putative. (185 aa)    
Predicted Functional Partners:
AF_0582
Predicted coding region AF_0582; Hypothetical protein; identified by GeneMark; putative.
     0.992
AF_1738
Predicted coding region AF_1738; Hypothetical protein; identified by GeneMark; putative.
 
    0.891
AF_0581
dolichol-P-glucose synthetase, putative; Similar to GB:L77117 SP:Q58619 PID:1591853 percent identity: 27.50; identified by sequence similarity; putative.
 
  
 0.879
AF_0580
Exodeoxyribonuclease III (xthA); Similar to PID:1653682 percent identity: 41.31; identified by sequence similarity; putative.
       0.774
AF_1153
Iron-sulfur cluster binding protein; Similar to PID:1652823 percent identity: 27.94; identified by sequence similarity; putative.
   
    0.734
AF_0753
Predicted coding region AF_0753; Hypothetical protein; identified by GeneMark; putative.
 
     0.720
AF_0579
Predicted coding region AF_0579; Hypothetical protein; identified by GeneMark; putative.
 
     0.718
AF_0584
Transcriptional regulatory protein, AsnC family; Similar to GB:L77117 SP:Q58133 PID:1591440 percent identity: 35.25; identified by sequence similarity; putative.
       0.718
AF_0585
Predicted coding region AF_0585; Hypothetical protein; identified by GeneMark; putative.
       0.718
AF_0586
Predicted coding region AF_0586; Hypothetical protein; identified by GeneMark; putative.
       0.718
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.