Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0595Polysaccharide biosynthesis protein, putative; Similar to GB:L77117 PID:1591720 percent identity: 24.05; identified by sequence similarity; putative. (482 aa)    
Predicted Functional Partners:
AF_0324
dTDP-glucose 4,6-dehydratase (rfbB); Similar to PID:567874 percent identity: 50.00; identified by sequence similarity; putative.
 
  
 0.942
AF_0325
Glucose-1-phosphate thymidylyltransferase (graD-2); Similar to PID:763512 percent identity: 43.11; identified by sequence similarity; putative.
 
  
 0.937
AF_0596
UDP-glucose dehydrogenase (ugd-2); Similar to GB:L77117 PID:1591706 percent identity: 44.10; identified by sequence similarity; putative.
  
  
 0.927
AF_0302
UDP-glucose dehydrogenase (ugd-1); Similar to GB:L77117 PID:1591706 percent identity: 43.83; identified by sequence similarity; putative.
  
  
 0.881
AF_2430
lacZ expression regulatory protein (icc); Similar to GB:D16557 SP:P36650 PID:453396 PID:882562 GB:U00096 percent identity: 29.55; identified by sequence similarity; putative.
     
 0.817
AF_0387
Glycosyltransferase, putative; Similar to PID:1652563 percent identity: 33.79; identified by sequence similarity; putative.
 
  
 0.673
AF_0038
Conserved hypothetical protein; Similar to GB:L77117 PID:1591805 percent identity: 31.71; identified by sequence similarity; putative.
 
  
 0.658
AF_1728
Galactosyltransferase; Similar to GB:L77117 PID:1591721 percent identity: 26.94; identified by sequence similarity; putative.
 
  
 0.653
AF_0327
Conserved hypothetical protein; Similar to PID:1001414 PID:1001478 percent identity: 26.94; identified by sequence similarity; putative.
 
  
 0.646
AF_0617
LPS biosynthesis protein, putative; Similar to GB:L77117 PID:1500505 percent identity: 29.04; identified by sequence similarity; putative.
 
  
 0.644
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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