STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0606First mannosyl transferase (wbaZ-2); Similar to GB:X61917 PID:47012 percent identity: 29.04; identified by sequence similarity; putative. (363 aa)    
Predicted Functional Partners:
AF_0607
LPS glycosyltransferase, putative; Similar to PID:1652520 percent identity: 29.68; identified by sequence similarity; putative.
 
     0.803
AF_0605
Predicted coding region AF_0605; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_0675
2-hydroxy-6-oxohepta-2,4-dienoate hydrolase (todF); Similar to GB:M64080 SP:P23133 GB:U18304 PID:151222 percent identity: 26.35; identified by sequence similarity; putative.
   
 
 0.741
AF_1563
Conserved hypothetical protein; Similar to SP:P29368 GB:M38048 SP:Q99390 PID:151837 PID:42626 percent identity: 33.94; identified by sequence similarity; putative.
   
 
 0.741
AF_0595
Polysaccharide biosynthesis protein, putative; Similar to GB:L77117 PID:1591720 percent identity: 24.05; identified by sequence similarity; putative.
 
  
 0.675
AF_0302
UDP-glucose dehydrogenase (ugd-1); Similar to GB:L77117 PID:1591706 percent identity: 43.83; identified by sequence similarity; putative.
 
  
 0.581
AF_0596
UDP-glucose dehydrogenase (ugd-2); Similar to GB:L77117 PID:1591706 percent identity: 44.10; identified by sequence similarity; putative.
 
  
 0.567
AF_0324
dTDP-glucose 4,6-dehydratase (rfbB); Similar to PID:567874 percent identity: 50.00; identified by sequence similarity; putative.
  
  
 0.566
AF_1728
Galactosyltransferase; Similar to GB:L77117 PID:1591721 percent identity: 26.94; identified by sequence similarity; putative.
  
     0.557
AF_0325
Glucose-1-phosphate thymidylyltransferase (graD-2); Similar to PID:763512 percent identity: 43.11; identified by sequence similarity; putative.
  
  
 0.548
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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