Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0617LPS biosynthesis protein, putative; Similar to GB:L77117 PID:1500505 percent identity: 29.04; identified by sequence similarity; putative. (358 aa)    
Predicted Functional Partners:
AF_0616
Conserved hypothetical protein; Similar to PID:1652163 percent identity: 28.15; identified by sequence similarity; putative.
     
 0.749
AF_0615
Predicted coding region AF_0615; Hypothetical protein; identified by GeneMark; putative.
     
 0.744
AF_0595
Polysaccharide biosynthesis protein, putative; Similar to GB:L77117 PID:1591720 percent identity: 24.05; identified by sequence similarity; putative.
 
  
 0.644
AF_0325
Glucose-1-phosphate thymidylyltransferase (graD-2); Similar to PID:763512 percent identity: 43.11; identified by sequence similarity; putative.
 
  
 0.593
AF_0324
dTDP-glucose 4,6-dehydratase (rfbB); Similar to PID:567874 percent identity: 50.00; identified by sequence similarity; putative.
  
  
 0.531
AF_0606
First mannosyl transferase (wbaZ-2); Similar to GB:X61917 PID:47012 percent identity: 29.04; identified by sequence similarity; putative.
 
     0.527
AF_0618
Conserved hypothetical protein; Similar to GP:1707702 percent identity: 34.57; identified by sequence similarity; putative.
       0.519
AF_0596
UDP-glucose dehydrogenase (ugd-2); Similar to GB:L77117 PID:1591706 percent identity: 44.10; identified by sequence similarity; putative.
 
  
 0.503
AF_0302
UDP-glucose dehydrogenase (ugd-1); Similar to GB:L77117 PID:1591706 percent identity: 43.83; identified by sequence similarity; putative.
 
  
 0.501
AF_0614
Predicted coding region AF_0614; Hypothetical protein; identified by GeneMark; putative.
       0.480
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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