Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AF_0640Nitrate ABC transporter, ATP-binding protein, putative; Similar to PID:1652569 percent identity: 32.54; identified by sequence similarity; putative. (359 aa)    
Predicted Functional Partners:
AF_0639
Nitrate ABC transporter, permease protein (nrtB-2); Similar to GB:L77117 SP:Q57856 PID:1591119 percent identity: 37.45; identified by sequence similarity; putative.
 
 0.999
AF_0638
Nitrate ABC transporter, ATP-binding protein (nrtC-2); Similar to GB:L77117 SP:Q57855 PID:1591118 percent identity: 55.51; identified by sequence similarity; putative.
 
 0.998
AF_0086
Nitrate ABC transporter, permease protein (nrtB-1); Similar to GB:L77117 SP:Q57856 PID:1591119 percent identity: 35.43; identified by sequence similarity; putative.
 
 
 0.942
AF_0087
Nitrate ABC transporter, ATP-binding protein (nrtC-1); Similar to GB:L77117 SP:Q57855 PID:1591118 percent identity: 47.42; identified by sequence similarity; putative.
 
 
 0.915
AF_0635
Immunogenic protein (bcsp31-2); Similar to SP:P12920 PID:144105 percent identity: 44.33; identified by sequence similarity; putative.
  
  
 0.783
AF_0636
Conserved hypothetical protein; Similar to GB:L42023 SP:P44483 PID:1004200 PID:1221956 PID:1204308 percent identity: 28.75; identified by sequence similarity; putative.
       0.773
AF_0637
Predicted coding region AF_0637; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_0641
ISA1214-3, ISORF2; Similar to GB:L77117 SP:Q57808 PID:1499149 percent identity: 26.53; identified by sequence similarity; putative.
       0.773
AF_0643
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58038 PID:1591332 percent identity: 39.10; identified by sequence similarity; putative.
       0.652
AF_0978
Nitrogen regulatory protein P-II (glnB-1); Similar to GB:L77117 SP:Q60381 PID:1592259 percent identity: 61.68; identified by sequence similarity; putative; Belongs to the P(II) protein family.
   
 
 0.593
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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