Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AF_0643Conserved hypothetical protein; Similar to GB:L77117 SP:Q58038 PID:1591332 percent identity: 39.10; identified by sequence similarity; putative. (156 aa)    
Predicted Functional Partners:
AF_0640
Nitrate ABC transporter, ATP-binding protein, putative; Similar to PID:1652569 percent identity: 32.54; identified by sequence similarity; putative.
       0.652
AF_0642
ISA1214-3, putative transposase; Similar to percent identity: 33.33; identified by sequence similarity; putative.
       0.529
AF_0639
Nitrate ABC transporter, permease protein (nrtB-2); Similar to GB:L77117 SP:Q57856 PID:1591119 percent identity: 37.45; identified by sequence similarity; putative.
       0.505
AF_0638
Nitrate ABC transporter, ATP-binding protein (nrtC-2); Similar to GB:L77117 SP:Q57855 PID:1591118 percent identity: 55.51; identified by sequence similarity; putative.
       0.501
AF_1554
Thioredoxin reductase (trxB); Similar to PID:1171125 SP:P52213 percent identity: 45.21; identified by sequence similarity; putative.
       0.494
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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