Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AF_0656Antibiotic maturation protein (pmbA); Similar to GB:L77117 SP:Q57684 PID:1590966 percent identity: 32.75; identified by sequence similarity; putative. (391 aa)    
Predicted Functional Partners:
AF_0655
Conserved hypothetical protein; Probable metalloprotease.
 
   
0.938
AF_0654
Conserved hypothetical protein; Similar to PID:1001414 PID:1001430 percent identity: 29.43; identified by sequence similarity; putative.
 
     0.806
AF_0364
ATP-dependent protease La (lon); ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Degrades polypeptides processively (By similarity).
  
    0.627
AF_1961
Pyruvate formate-lyase activating enzyme (pflX); Similar to PID:1016358 percent identity: 50.15; identified by sequence similarity; putative.
       0.624
AF_0653
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57807 PID:1591070 percent identity: 35.06; identified by sequence similarity; putative.
       0.542
AF_2038
Conserved hypothetical protein; Similar to GB:L77117 PID:1592339 percent identity: 39.49; identified by sequence similarity; putative.
   
    0.519
purB
Adenylosuccinate lyase (purB); Similar to GB:L77117 PID:1591600 percent identity: 52.27; identified by sequence similarity; putative.
 
   
 0.431
cofG
Conserved hypothetical protein; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.
 
    0.427
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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