Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AF_0659Type II secretion system protein (gspE-2); Similar to GB:L77117 SP:Q58310 PID:1591575 percent identity: 38.17; identified by sequence similarity; putative. (511 aa)    
Predicted Functional Partners:
AF_0658
Conserved hypothetical protein; Similar to GB:L77117 PID:1591923 percent identity: 24.75; identified by sequence similarity; putative.
 
  
 0.957
AF_1048
Conserved hypothetical protein; Similar to GB:L77117 PID:1591576 percent identity: 28.23; identified by sequence similarity; putative.
 
  
 0.865
AF_0995
Conserved hypothetical protein; Similar to GB:L77117 PID:1591923 percent identity: 26.90; identified by sequence similarity; putative.
 
  
 0.824
AF_0657
Predicted coding region AF_0657; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_1050
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 29.44; identified by sequence similarity; putative.
 
  
 0.741
AF_1052
Predicted coding region AF_1052; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.721
AF_0661
Heterodisulfide reductase, subunit E, putative; Similar to GP:1890197 percent identity: 25.35; identified by sequence similarity; putative.
     
 0.632
AF_0660
Conserved hypothetical protein; Similar to SP:P42979 PID:755602 PID:1146233 GB:AL009126 percent identity: 45.10; identified by sequence similarity; putative.
       0.631
AF_0662
Heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
       0.631
AF_0663
Heterodisulfide reductase, subunit A (hdrA-1); Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
       0.631
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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