Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0706Conserved hypothetical protein; Similar to GB:L77117 PID:1591604 percent identity: 36.12; identified by sequence similarity; putative. (403 aa)    
Predicted Functional Partners:
AF_0707
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58767 PID:1592017 percent identity: 43.83; identified by sequence similarity; putative.
 
   
 0.866
AF_1309
Conserved hypothetical protein; Similar to PID:1653859 percent identity: 32.14; identified by sequence similarity; putative.
 
     0.623
apgM1
Phosphonopyruvate decarboxylase (bcpC-2); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily.
       0.601
AF_0708
Conserved hypothetical protein; Similar to percent identity: 38.78; identified by sequence similarity; putative.
       0.600
AF_0709
Predicted coding region AF_0709; Hypothetical protein; identified by GeneMark; putative.
       0.585
AF_2198
Conserved hypothetical protein; Similar to SP:Q10645 PID:1340100 percent identity: 23.28; identified by sequence similarity; putative.
 
     0.569
rps3ae
SSU ribosomal protein S3AE (rps3AE); Similar to GB:L77117 SP:P54059 PID:1499819 percent identity: 39.42; identified by sequence similarity; putative; Belongs to the eukaryotic ribosomal protein eS1 family.
       0.558
AF_0364
ATP-dependent protease La (lon); ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Degrades polypeptides processively (By similarity).
 
     0.408
AF_1023
Bacteriochlorophyll synthase, 43 kDa subunit (chlP-2); Similar to GB:L77117 SP:Q58915 PID:1592151 percent identity: 31.22; identified by sequence similarity; putative.
 
     0.407
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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