STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ppaCExopolyphosphatase (ppx1); Similar to GB:L77117 SP:Q58025 PID:1591318 percent identity: 55.12; identified by sequence similarity; putative. (322 aa)    
Predicted Functional Partners:
AF_1160
H+-transporting ATP synthase, subunit K (atpK-1); Similar to GB:L77117 SP:Q57674 PID:1590959 percent identity: 46.27; identified by sequence similarity; putative.
  
 
 0.925
atpF
H+-transporting ATP synthase, subunit F (atpF); Produces ATP from ADP in the presence of a proton gradient across the membrane.
  
 
  0.907
atpI
H+-transporting ATP synthase, subunit I (atpI); Produces ATP from ADP in the presence of a proton gradient across the membrane; Belongs to the V-ATPase 116 kDa subunit family.
    
  0.904
atpB
H+-transporting ATP synthase, subunit B (atpB); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal beta chain is a regulatory subunit.
  
 
  0.904
AF_1158
ATP synthase, subunit E, putative; Similar to GB:L77117 SP:Q57673 PID:1590957 percent identity: 47.06; identified by sequence similarity; putative.
    
  0.900
atpE
H+-transporting ATP synthase, subunit E (atpE); Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.900
atpC
H+-transporting ATP synthase, subunit C (atpC); Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.900
atpA
H+-transporting ATP synthase, subunit A (atpA); Produces ATP from ADP in the presence of a proton gradient across the membrane. The archaeal alpha chain is a catalytic subunit (By similarity); Belongs to the ATPase alpha/beta chains family.
    
  0.900
atpD
H+-transporting ATP synthase, subunit D (atpD); Produces ATP from ADP in the presence of a proton gradient across the membrane.
    
  0.900
AF_0755
Heterodisulfide reductase, subunits E and D, putative; Similar to GP:1890198 percent identity: 31.81; identified by sequence similarity; putative.
     
 0.691
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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