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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0775Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 23.83; identified by sequence similarity; putative. (253 aa)    
Predicted Functional Partners:
AF_0772
Predicted coding region AF_0772; Hypothetical protein; identified by GeneMark; putative.
       0.791
AF_0773
Predicted coding region AF_0773; Hypothetical protein; identified by GeneMark; putative.
       0.775
AF_0774
Predicted coding region AF_0774; Hypothetical protein; identified by GeneMark; putative.
       0.775
AF_0354
Conserved hypothetical protein; Similar to PID:1653695 percent identity: 26.90; identified by sequence similarity; putative.
 
     0.696
AF_0518
Conserved hypothetical protein; Similar to GB:L77117 PID:1592003 percent identity: 34.55; identified by sequence similarity; putative.
  
     0.680
AF_1484
Predicted coding region AF_1484; Hypothetical protein; identified by GeneMark; putative.
  
     0.635
AF_1050
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 29.44; identified by sequence similarity; putative.
 
     0.549
tyrS
tyrosyl-tRNA synthetase (tyrS); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
       0.533
eIF1A
Translation initiation factor eIF-1A (eif1A); Seems to be required for maximal rate of protein biosynthesis. Enhances ribosome dissociation into subunits and stabilizes the binding of the initiator Met-tRNA(I) to 40 S ribosomal subunits (By similarity).
       0.486
AF_0778
Predicted coding region AF_0778; Hypothetical protein; identified by GeneMark; putative.
       0.483
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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