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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0784Predicted coding region AF_0784; Hypothetical protein; identified by GeneMark; putative. (81 aa)    
Predicted Functional Partners:
tatC
Conserved hypothetical transmembrane protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.
  
 
 0.928
AF_1512
Conserved hypothetical protein; Similar to GB:L42023 SP:P44560 PID:1003276 PID:1222105 PID:1204445 percent identity: 27.64; identified by sequence similarity; putative.
  
 
 0.928
AF_1011
Conserved hypothetical protein; Similar to SP:P53259 PID:1323155 percent identity: 35.92; identified by sequence similarity; putative.
  
 
 0.809
guaAB
GMP synthase (guaA-1); Catalyzes the synthesis of GMP from XMP.
  
  
 0.659
AF_1277
Conserved hypothetical protein; Similar to PID:1001350 PID:1001348 percent identity: 41.36; identified by sequence similarity; putative.
  
  
 0.605
guaAA
GMP synthase (guaA-2); Catalyzes the synthesis of GMP from XMP.
  
  
 0.605
corA
Magnesium and cobalt transporter (corA); Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.
       0.579
AF_0785
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58091 PID:1591393 percent identity: 26.22; identified by sequence similarity; putative.
       0.575
tatA
Conserved hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
       0.470
AF_2211
HIT family protein (hit); Similar to GB:L77117 SP:Q58276 PID:1499694 percent identity: 29.63; identified by sequence similarity; putative.
  
    0.409
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.