Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0788Conserved hypothetical protein; Similar to GB:D26185 SP:P37511 PID:467365 GB:AL009126 percent identity: 25.84; identified by sequence similarity; putative. (308 aa)    
Predicted Functional Partners:
AF_0787
Predicted coding region AF_0787; Hypothetical protein; identified by GeneMark; putative.
     
 0.860
AF_0789
Predicted coding region AF_0789; Hypothetical protein; identified by GeneMark; putative.
       0.559
AF_0266
Conserved hypothetical protein; Similar to GB:D26185 SP:P37511 PID:467365 GB:AL009126 percent identity: 29.52; identified by sequence similarity; putative.
  
     0.504
AF_0251
Predicted coding region AF_0251; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.498
AF_0458
Phosphomannomutase (pmm); Similar to GB:L77117 PID:1591745 percent identity: 39.46; identified by sequence similarity; putative; Belongs to the phosphohexose mutase family.
     
 0.494
AF_1245
Na+/H+ antiporter (napA-2); Similar to SP:P26235 PID:148316 percent identity: 28.41; identified by sequence similarity; putative.
  
  
 0.465
AF_0013
Hexuronate transporter (exuT); Similar to SP:P42609 PID:606034 PID:1160319 GB:U00096 PID:2367193 percent identity: 24.53; identified by sequence similarity; putative.
  
  
 0.463
AF_0246
Iron (II) transporter (feoB-1); Similar to GB:L77117 SP:Q57986 PID:1591272 percent identity: 33.33; identified by sequence similarity; putative.
     
 0.463
AF_1766
Amino-acid ABC transporter, periplasmic binding protein/protein kinase; Similar to SP:P54952 PID:1408498 GB:AL009126 percent identity: 27.40; identified by sequence similarity; putative.
 
  
 0.453
AF_0401
Carbohydrate kinase, pfkB family; Similar to SP:P40713 PID:608707 percent identity: 34.10; identified by sequence similarity; putative.
     
 0.447
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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