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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0806L-lactate permease (lctP); Similar to SP:P33231 GB:L13970 PID:404693 PID:466741 GB:U00096 percent identity: 31.70; identified by sequence similarity; putative. (544 aa)    
Predicted Functional Partners:
AF_0811
Conserved hypothetical protein; Similar to GP:1657506 percent identity: 32.60; identified by sequence similarity; putative.
 
  
 0.935
AF_0807
L-lactate dehydrogenase, cytochrome-type (lldD); Similar to SP:P33232 GB:L13970 PID:404695 PID:466743 GB:U00096 percent identity: 39.41; identified by sequence similarity; putative.
 
  
 0.934
mdh
L-malate dehydrogenase, NAD+-dependent (mdhA); Catalyzes the reversible oxidation of malate to oxaloacetate. Can also oxidize tartrate.
  
  
 0.868
fni
Carotenoid biosynthetic gene ERWCRTS, putative; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).
  
  
 0.856
AF_0810
Predicted coding region AF_0810; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.714
AF_0809
Heterodisulfide reductase, subunit D, putative; Similar to GP:1890198 percent identity: 29.34; identified by sequence similarity; putative.
  
  
 0.689
AF_0867
Reductase, putative; Similar to GP:1890198 percent identity: 33.33; identified by sequence similarity; putative.
  
  
 0.688
AF_0661
Heterodisulfide reductase, subunit E, putative; Similar to GP:1890197 percent identity: 25.35; identified by sequence similarity; putative.
  
  
 0.662
AF_0543
Conserved hypothetical protein; Similar to GB:L16784 SP:P33393 PID:290382 percent identity: 35.36; identified by sequence similarity; putative.
 
  
 0.661
dld
D-lactate dehydrogenase, cytochrome-type (dld); Converts D-lactate to pyruvate. Cannot use NAD(+), cytochrome C, methylene blue or dimethylnaphthoquinone as acceptors. Active in vitro with artificial electron acceptors such as 2,6- dichlorophenolindophenol, but the physiological acceptor is not yet known.
  
  
 0.626
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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