Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0808Glycolate oxidase subunit (glcD); Similar to PID:1001103 PID:1001117 percent identity: 32.01; identified by sequence similarity; putative. (461 aa)    
Predicted Functional Partners:
AF_0444
Conserved hypothetical protein; Catalyzes the dephosphorylation of 2-phosphoglycolate.
    
 0.903
AF_0807
L-lactate dehydrogenase, cytochrome-type (lldD); Similar to SP:P33232 GB:L13970 PID:404695 PID:466743 GB:U00096 percent identity: 39.41; identified by sequence similarity; putative.
 
 
 0.848
AF_0287
Electron transfer flavoprotein, subunit alpha (etfA); Similar to PID:596026 SP:P53571 percent identity: 39.75; identified by sequence similarity; putative.
 
 
 0.812
AF_0809
Heterodisulfide reductase, subunit D, putative; Similar to GP:1890198 percent identity: 29.34; identified by sequence similarity; putative.
 
  
 0.761
AF_0811
Conserved hypothetical protein; Similar to GP:1657506 percent identity: 32.60; identified by sequence similarity; putative.
  
  
 0.751
AF_0190
Cytochrome C oxidase, subunit II, putative; Similar to GB:M94110 SP:Q04441 PID:142786 percent identity: 31.71; identified by sequence similarity; putative.
   
 
 0.679
AF_0286
Electron transfer flavoprotein, subunit beta (etfB); Similar to GP:1903329 percent identity: 38.80; identified by sequence similarity; putative.
  
 
 0.663
AF_0867
Reductase, putative; Similar to GP:1890198 percent identity: 33.33; identified by sequence similarity; putative.
  
  
 0.608
AF_0806
L-lactate permease (lctP); Similar to SP:P33231 GB:L13970 PID:404693 PID:466741 GB:U00096 percent identity: 31.70; identified by sequence similarity; putative.
  
  
 0.605
AF_0547
Reductase, iron-sulfur binding subunit; Similar to GP:1890198 percent identity: 28.33; identified by sequence similarity; putative.
  
  
 0.555
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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