| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AF_1417 | glyA | AF_1417 | AF_0852 | Aspartate aminotransferase (aspC); Similar to GB:L77117 PID:1591623 percent identity: 49.29; identified by sequence similarity; putative. | Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family. | 0.573 |
| AF_1417 | serA | AF_1417 | AF_0813 | Aspartate aminotransferase (aspC); Similar to GB:L77117 PID:1591623 percent identity: 49.29; identified by sequence similarity; putative. | Phosphoglycerate dehydrogenase (serA); Similar to GB:L77117 PID:1591676 percent identity: 48.77; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.766 |
| apgM1 | apgM2 | AF_1751 | AF_1425 | Phosphonopyruvate decarboxylase (bcpC-2); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily. | Phosphonopyruvate decarboxylase (bcpC-1); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.910 |
| apgM1 | serA | AF_1751 | AF_0813 | Phosphonopyruvate decarboxylase (bcpC-2); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily. | Phosphoglycerate dehydrogenase (serA); Similar to GB:L77117 PID:1591676 percent identity: 48.77; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.911 |
| apgM2 | apgM1 | AF_1425 | AF_1751 | Phosphonopyruvate decarboxylase (bcpC-1); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Phosphonopyruvate decarboxylase (bcpC-2); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily. | 0.910 |
| apgM2 | serA | AF_1425 | AF_0813 | Phosphonopyruvate decarboxylase (bcpC-1); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | Phosphoglycerate dehydrogenase (serA); Similar to GB:L77117 PID:1591676 percent identity: 48.77; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.911 |
| aroE | glyA | AF_2327 | AF_0852 | Shikimate 5-dehydrogenase (aroE); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family. | 0.850 |
| aroE | serA | AF_2327 | AF_0813 | Shikimate 5-dehydrogenase (aroE); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | Phosphoglycerate dehydrogenase (serA); Similar to GB:L77117 PID:1591676 percent identity: 48.77; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.840 |
| glyA | AF_1417 | AF_0852 | AF_1417 | Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family. | Aspartate aminotransferase (aspC); Similar to GB:L77117 PID:1591623 percent identity: 49.29; identified by sequence similarity; putative. | 0.573 |
| glyA | aroE | AF_0852 | AF_2327 | Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family. | Shikimate 5-dehydrogenase (aroE); Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.850 |
| glyA | rpl2 | AF_0852 | AF_1922 | Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family. | LSU ribosomal protein L2P (rpl2P); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.701 |
| glyA | serA | AF_0852 | AF_0813 | Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family. | Phosphoglycerate dehydrogenase (serA); Similar to GB:L77117 PID:1591676 percent identity: 48.77; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.940 |
| rpl10e | rpl13 | AF_1339 | AF_1128 | Ubiquinol-cytochrome C reductase complex, subunit VI requiring protein; Similar to GB:L77117 SP:Q57963 PID:1591247 percent identity: 60.95; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uL16 family. | LSU ribosomal protein L13P (rpl13P); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.999 |
| rpl10e | rpl2 | AF_1339 | AF_1922 | Ubiquinol-cytochrome C reductase complex, subunit VI requiring protein; Similar to GB:L77117 SP:Q57963 PID:1591247 percent identity: 60.95; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uL16 family. | LSU ribosomal protein L2P (rpl2P); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
| rpl10e | rpl22 | AF_1339 | AF_1920 | Ubiquinol-cytochrome C reductase complex, subunit VI requiring protein; Similar to GB:L77117 SP:Q57963 PID:1591247 percent identity: 60.95; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uL16 family. | LSU ribosomal protein L22P (rpl22P); This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
| rpl10e | rpl6 | AF_1339 | AF_1909 | Ubiquinol-cytochrome C reductase complex, subunit VI requiring protein; Similar to GB:L77117 SP:Q57963 PID:1591247 percent identity: 60.95; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uL16 family. | LSU ribosomal protein L6P (rpl6P); This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family. | 0.999 |
| rpl10e | serA | AF_1339 | AF_0813 | Ubiquinol-cytochrome C reductase complex, subunit VI requiring protein; Similar to GB:L77117 SP:Q57963 PID:1591247 percent identity: 60.95; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uL16 family. | Phosphoglycerate dehydrogenase (serA); Similar to GB:L77117 PID:1591676 percent identity: 48.77; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.784 |
| rpl13 | rpl10e | AF_1128 | AF_1339 | LSU ribosomal protein L13P (rpl13P); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | Ubiquinol-cytochrome C reductase complex, subunit VI requiring protein; Similar to GB:L77117 SP:Q57963 PID:1591247 percent identity: 60.95; identified by sequence similarity; putative; Belongs to the universal ribosomal protein uL16 family. | 0.999 |
| rpl13 | rpl2 | AF_1128 | AF_1922 | LSU ribosomal protein L13P (rpl13P); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L2P (rpl2P); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.999 |
| rpl13 | rpl22 | AF_1128 | AF_1920 | LSU ribosomal protein L13P (rpl13P); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | LSU ribosomal protein L22P (rpl22P); This protein binds specifically to 23S rRNA. It makes multiple contacts with different domains of the 23S rRNA in the assembled 50S subunit and ribosome. | 0.999 |
STRING v12.5 is now available!
