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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0835Predicted coding region AF_0835; Hypothetical protein; identified by GeneMark; putative. (107 aa)    
Predicted Functional Partners:
AF_0834
Ferritin, putative; Similar to GB:L42023 SP:P43707 PID:1007431 PID:1221522 PID:1205619 percent identity: 39.75; identified by sequence similarity; putative.
       0.732
AF_0832
Rubrerythrin (rr1); Similar to GB:L77117 SP:Q58144 PID:1591449 percent identity: 45.65; identified by sequence similarity; putative.
       0.716
AF_0833
Desulfoferrodoxin (dfx); Similar to GB:M81168 SP:P20418 GB:M28848 PID:145115 PID:758676 percent identity: 63.03; identified by sequence similarity; putative; Belongs to the desulfoferrodoxin family.
       0.716
AF_0831
Rubrerythrin (rr2); Similar to GB:L77117 SP:Q58144 PID:1591449 percent identity: 63.74; identified by sequence similarity; putative.
       0.706
AF_0829
Predicted coding region AF_0829; Hypothetical protein; identified by GeneMark; putative.
       0.678
feR
Conserved hypothetical protein; Catalyzes the reduction of bound ferric iron (Fe(3+)) in a variety of iron chelators (siderophores) using NAD(P)H as the electron donor, resulting in the release of Fe(2+). Not active with uncomplexed Fe(3+). Also reduces FMN and FAD, but not riboflavin. Belongs to the non-flavoprotein flavin reductase family.
       0.678
AF_0836
Predicted coding region AF_0836; Hypothetical protein; identified by GeneMark; putative.
       0.572
pelA
Cell division protein pelota (pelA); May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity.
       0.442
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.