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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0839TRK potassium uptake system protein (trkH); Similar to GB:U00096 PID:2367317 percent identity: 38.69; identified by sequence similarity; putative. (478 aa)    
Predicted Functional Partners:
AF_0218
TRK potassium uptake system protein (trkA-1); Similar to GB:X74307 SP:P39449 PID:414170 percent identity: 30.17; identified by sequence similarity; putative.
  
 
 0.979
trkA
TRK potassium uptake system protein (trkA-2); Part of a potassium transport system.
 
   
 0.970
AF_0209
Conserved hypothetical protein; Similar to SP:P26615 GB:M87049 GB:X65013 PID:148243 percent identity: 42.53; identified by sequence similarity; putative; Belongs to the UbiD family.
      0.757
pelA
Cell division protein pelota (pelA); May function in recognizing stalled ribosomes, interact with stem-loop structures in stalled mRNA molecules, and effect endonucleolytic cleavage of the mRNA. May play a role in the release non-functional ribosomes and degradation of damaged mRNAs. Has endoribonuclease activity.
       0.682
AF_0846
Na+/H+ antiporter (nhe2); Similar to PID:1653577 percent identity: 33.13; identified by sequence similarity; putative.
   
 
 0.654
AF_1512
Conserved hypothetical protein; Similar to GB:L42023 SP:P44560 PID:1003276 PID:1222105 PID:1204445 percent identity: 27.64; identified by sequence similarity; putative.
  
  
 0.608
AF_0836
Predicted coding region AF_0836; Hypothetical protein; identified by GeneMark; putative.
       0.519
AF_0840
long-chain-fatty-acid--CoA ligase (fadD-4); Similar to SP:P29212 GB:L02649 GB:X70994 PID:581070 GB:U00096 percent identity: 38.12; identified by sequence similarity; putative.
       0.499
AF_1415
Chloride channel, putative; Similar to PID:1653666 percent identity: 27.29; identified by sequence similarity; putative.
 
  
 0.491
AF_1828
NADH dehydrogenase, subunit 3; Similar to SP:P25707 percent identity: 24.30; identified by sequence similarity; putative.
     
 0.491
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.