Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0846Na+/H+ antiporter (nhe2); Similar to PID:1653577 percent identity: 33.13; identified by sequence similarity; putative. (494 aa)    
Predicted Functional Partners:
AF_1822
Serine/threonine phosphatase (ppa); Similar to PID:1016001 percent identity: 31.94; identified by sequence similarity; putative.
 
 
 
 0.604
AF_0845
acyl-CoA dehydrogenase (acd-5); Similar to SP:P45867 PID:853760 GB:AL009126 percent identity: 44.59; identified by sequence similarity; putative.
     
 0.597
AF_0847
Inosine monophosphate dehydrogenase (guaB-1); Similar to GB:L77117 SP:Q58069 PID:1592300 percent identity: 41.58; identified by sequence similarity; putative.
 
 
   0.595
AF_0251
Predicted coding region AF_0251; Hypothetical protein; identified by GeneMark; putative.
   
 
 0.576
nadE
NH(3)-dependent NAD+ synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.567
AF_1388
DNA helicase, putative; Similar to GB:L77117 SP:Q57568 PID:1590880 percent identity: 46.83; identified by sequence similarity; putative.
   
 
 0.543
AF_1953
Predicted coding region AF_1953; Hypothetical protein; identified by GeneMark; putative.
   
 
 0.543
AF_1960
DNA helicase, putative; Similar to GB:L77117 SP:Q57568 PID:1590880 percent identity: 32.71; identified by sequence similarity; putative.
   
 
 0.543
AF_0839
TRK potassium uptake system protein (trkH); Similar to GB:U00096 PID:2367317 percent identity: 38.69; identified by sequence similarity; putative.
  
 
 0.536
AF_1415
Chloride channel, putative; Similar to PID:1653666 percent identity: 27.29; identified by sequence similarity; putative.
 
  
 0.530
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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