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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0872Predicted coding region AF_0872; Hypothetical protein; identified by GeneMark; putative. (64 aa)    
Predicted Functional Partners:
gpsA
Glycerol-3-phosphate dehydrogenase (NAD(P)+) (gpsA); Similar to SP:P46919 PID:974332 PID:1146220 GB:AL009126 percent identity: 36.31; identified by sequence similarity; putative.
       0.557
pyrH
Uridylate kinase (pyrH); Catalyzes the reversible phosphorylation of UMP to UDP.
  
    0.533
AF_0869
Conserved hypothetical protein; Similar to GP:1402531 percent identity: 48.31; identified by sequence similarity; putative; Belongs to the UPF0145 family.
       0.528
AF_0868
Alkyldihydroxyacetonephosphate synthase; Similar to GP:1808596 percent identity: 33.55; identified by sequence similarity; putative.
       0.522
AF_0866
Glycerol kinase (glpK); Similar to GB:M34393 SP:P18157 PID:142992 PID:2226137 GB:AL009126 percent identity: 33.83; identified by sequence similarity; putative; Belongs to the FGGY kinase family.
       0.520
AF_0867
Reductase, putative; Similar to GP:1890198 percent identity: 33.33; identified by sequence similarity; putative.
       0.520
AF_0870
Predicted coding region AF_0870; Hypothetical protein; identified by GeneMark; putative.
       0.520
rtcB
Conserved hypothetical protein; GTP-dependent RNA ligase that is involved in tRNA splicing and RNA repair. Joins RNA with 2',3'-cyclic-phosphate or 3'-phosphate ends to RNA with 5'-hydroxy ends; Belongs to the RtcB family.
       0.425
AF_0863
Predicted coding region AF_0863; Hypothetical protein; identified by GeneMark; putative.
       0.425
AF_0864
Predicted coding region AF_0864; Hypothetical protein; identified by GeneMark; putative.
       0.425
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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