close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0887Ribose ABC transporter, ATP-binding protein (rbsA-1); Similar to GB:L10328 SP:P04983 GB:M13169 PID:147513 PID:290599 percent identity: 33.27; identified by sequence similarity; putative. (495 aa)    
Predicted Functional Partners:
AF_0888
Ribose ABC transporter, permease protein (rbsC-1); Similar to GB:U02147 GB:X61535 GB:L43967 PID:1045800 SP:P47366 percent identity: 24.09; identified by sequence similarity; putative.
 
 0.999
AF_0889
Ribose ABC transporter, permease protein (rbsC-2); Similar to SP:P36948 GB:Z25798 PID:397498 PID:1894758 GB:AL009126 percent identity: 31.25; identified by sequence similarity; putative.
 
 0.999
AF_0890
Predicted coding region AF_0890; Hypothetical protein; identified by GeneMark; putative.
 
 
 0.996
AF_0824
Branched-chain amino acid ABC transporter, permease protein (braE-2); Similar to SP:P22729 GB:U00039 PID:466592 GB:U00096 PID:1789865 percent identity: 31.33; identified by sequence similarity; putative.
      0.788
AF_1005
ABC transporter, ATP-binding protein, putative; Similar to SP:P37624 PID:912462 PID:2367231 percent identity: 26.69; identified by sequence similarity; putative.
      0.754
AF_0225
Branched-chain amino acid ABC transporter, permease protein (braE-1); Similar to PID:146634 percent identity: 28.72; identified by sequence similarity; putative.
      0.723
AF_0886
S-adenosylhomocysteinase hydrolase (ahcY-1); Similar to GB:L77117 PID:1592034 percent identity: 31.71; identified by sequence similarity; putative.
       0.541
AF_0885
4-hydroxyphenylacetate-3-hydroxylase (hpaA-2); Similar to PID:974146 percent identity: 26.01; identified by sequence similarity; putative.
       0.439
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.