Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_0951NADH oxidase (noxA-4); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 36.71; identified by sequence similarity; putative. (429 aa)    
Predicted Functional Partners:
AF_0950
Carbon monoxide dehydrogenase, iron sulfur subunit (cooF); Similar to GB:M90421 SP:P31894 PID:1171263 PID:1498747 percent identity: 38.89; identified by sequence similarity; putative.
   
 0.976
AF_0954
Conserved hypothetical protein; Similar to GB:L77117 PID:1591993 percent identity: 46.64; identified by sequence similarity; putative.
 
  
 0.935
AF_0952
Conserved hypothetical protein; Similar to GP:870980 percent identity: 28.51; identified by sequence similarity; putative.
 
   
 0.933
AF_0167
Flavoprotein (fprA-1); Similar to GB:L77117 SP:Q58142 PID:1591446 percent identity: 33.23; identified by sequence similarity; putative.
    
 0.919
AF_1203
Molybdopterin oxidoreductase, molybdopterin binding subunit; Similar to SP:P31075 GB:X65042 PID:48526 percent identity: 30.05; identified by sequence similarity; putative.
    
 0.909
AF_1520
Flavoprotein (fprA-2); Similar to GB:L77117 SP:Q58142 PID:1591446 percent identity: 47.15; identified by sequence similarity; putative.
    
 0.902
gltB
Glutamate synthase (gltB); Similar to PID:1591994 GB:L77117 PID:1591994 percent identity: 57.85; identified by sequence similarity; putative; Belongs to the glutamate synthase family.
 
  
 0.878
AF_0164
Ferredoxin-nitrite reductase (nirA); Similar to PID:1001216 PID:1001208 percent identity: 29.72; identified by sequence similarity; putative.
 
 0.753
AF_0274
Sarcosine oxidase, subunit beta (soxB); Similar to SP:P40875 PID:927589 percent identity: 26.45; identified by sequence similarity; putative.
  
 
 0.721
glnA
Glutamine synthetase (glnA); Probably involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Beta-glutamate is a much poorer substrate than alpha-glutamate; Belongs to the glutamine synthetase family.
     
 0.575
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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