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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0961Branched-chain amino acid ABC transporter, permease protein (braD-3); Similar to SP:P08340 GB:U00039 PID:146633 PID:466593 GB:U00096 percent identity: 23.73; identified by sequence similarity; putative. (241 aa)    
Predicted Functional Partners:
AF_0960
Branched-chain amino acid ABC transporter, permease protein (braE-3); Similar to GB:D12589 SP:P30296 PID:217073 percent identity: 30.12; identified by sequence similarity; putative.
 
 
 0.993
AF_0959
Branched-chain amino acid ABC transporter, ATP-binding protein (braF-3) {Methanococcus jannasch; Similar to GB:L77117 PID:1591902 percent identity: 37.61; identified by sequence similarity; putative.
 
 
 0.985
AF_0958
Branched-chain amino acid ABC transporter, ATP-binding protein (braG-3); Similar to GB:D90223 SP:P21630 PID:216867 percent identity: 34.13; identified by sequence similarity; putative.
  
 
 0.974
AF_0225
Branched-chain amino acid ABC transporter, permease protein (braE-1); Similar to PID:146634 percent identity: 28.72; identified by sequence similarity; putative.
 
 
 0.942
AF_0824
Branched-chain amino acid ABC transporter, permease protein (braE-2); Similar to SP:P22729 GB:U00039 PID:466592 GB:U00096 PID:1789865 percent identity: 31.33; identified by sequence similarity; putative.
 
 
 0.940
AF_1393
Branched-chain amino acid ABC transporter, permease protein (braE-4); Similar to GB:L77117 PID:1591905 percent identity: 60.53; identified by sequence similarity; putative.
  
 
 0.929
AF_0222
Branched-chain amino acid ABC transporter, ATP-binding protein (braF-1); Similar to GB:J05516 SP:P22730 PID:146635 PID:466591 GB:U00096 percent identity: 41.59; identified by sequence similarity; putative.
  
 
 0.928
AF_0823
Branched-chain amino acid ABC transporter, ATP-binding protein (braG-2); Similar to GB:J05516 SP:P22730 PID:146635 PID:466591 GB:U00096 percent identity: 42.51; identified by sequence similarity; putative.
  
 
 0.928
livG
Branched-chain amino acid ABC transporter, ATP-binding protein (braF-4) {Methanococcus jannasch; Probable component of a branched-chain amino-acid transport system.
  
 
 0.928
AF_0962
Branched-chain amino acid ABC transporter, periplasmic binding protein (braC-3); Similar to GB:D90223 SP:P21175 GB:M31071 PID:151110 PID:216863 percent identity: 25.58; identified by sequence similarity; putative.
 
  
 0.925
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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