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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_0988Immunogenic protein (bcsp31-3); Similar to SP:P12920 PID:144105 percent identity: 28.26; identified by sequence similarity; putative. (347 aa)    
Predicted Functional Partners:
AF_0989
Conserved hypothetical protein; Similar to GB:L42023 SP:P44543 PID:1003195 PID:1222060 PID:1204404 percent identity: 21.30; identified by sequence similarity; putative.
 
  
 0.946
AF_0636
Conserved hypothetical protein; Similar to GB:L42023 SP:P44483 PID:1004200 PID:1221956 PID:1204308 percent identity: 28.75; identified by sequence similarity; putative.
 
  
 0.785
AF_0466
Conserved hypothetical protein; Similar to GB:L42023 SP:P44993 PID:1006258 PID:1221144 PID:1205278 percent identity: 25.21; identified by sequence similarity; putative.
 
  
 0.783
AF_0987
Conserved hypothetical protein; Similar to GP:1526550 percent identity: 32.06; identified by sequence similarity; putative.
  
    0.582
hisA
Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase (hisA-2); Similar to GB:L77117 SP:Q58927 PID:1592163 percent identity: 42.24; identified by sequence similarity; putative.
       0.496
hisB
Imidazoleglycerol-phosphate dehydrogenase/histidinol-phosphatase (hisB); Similar to GB:L77117 SP:Q58109 PID:1591413 percent identity: 42.24; identified by sequence similarity; putative.
       0.485
AF_0984
ABC transporter, ATP-binding protein; Similar to SP:P46903 PID:973330 PID:2415726 GB:AL009126 percent identity: 35.16; identified by sequence similarity; putative.
       0.483
AF_0983
Predicted coding region AF_0983; Hypothetical protein; identified by GeneMark; putative.
       0.481
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.