Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AF_0999 | AF_1001 | AF_0999 | AF_1001 | Predicted coding region AF_0999; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region AF_1001; Hypothetical protein; identified by GeneMark; putative. | 0.601 |
AF_0999 | AF_1002 | AF_0999 | AF_1002 | Predicted coding region AF_0999; Hypothetical protein; identified by GeneMark; putative. | Conserved hypothetical protein; Similar to PID:1001103 PID:1001123 percent identity: 35.54; identified by sequence similarity; putative. | 0.456 |
AF_0999 | nadE | AF_0999 | AF_1000 | Predicted coding region AF_0999; Hypothetical protein; identified by GeneMark; putative. | NH(3)-dependent NAD+ synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.773 |
AF_1001 | AF_0999 | AF_1001 | AF_0999 | Predicted coding region AF_1001; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region AF_0999; Hypothetical protein; identified by GeneMark; putative. | 0.601 |
AF_1001 | AF_1002 | AF_1001 | AF_1002 | Predicted coding region AF_1001; Hypothetical protein; identified by GeneMark; putative. | Conserved hypothetical protein; Similar to PID:1001103 PID:1001123 percent identity: 35.54; identified by sequence similarity; putative. | 0.576 |
AF_1001 | AF_1003 | AF_1001 | AF_1003 | Predicted coding region AF_1001; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region AF_1003; Hypothetical protein; identified by GeneMark; putative. | 0.423 |
AF_1001 | nadE | AF_1001 | AF_1000 | Predicted coding region AF_1001; Hypothetical protein; identified by GeneMark; putative. | NH(3)-dependent NAD+ synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.601 |
AF_1002 | AF_0999 | AF_1002 | AF_0999 | Conserved hypothetical protein; Similar to PID:1001103 PID:1001123 percent identity: 35.54; identified by sequence similarity; putative. | Predicted coding region AF_0999; Hypothetical protein; identified by GeneMark; putative. | 0.456 |
AF_1002 | AF_1001 | AF_1002 | AF_1001 | Conserved hypothetical protein; Similar to PID:1001103 PID:1001123 percent identity: 35.54; identified by sequence similarity; putative. | Predicted coding region AF_1001; Hypothetical protein; identified by GeneMark; putative. | 0.576 |
AF_1002 | AF_1003 | AF_1002 | AF_1003 | Conserved hypothetical protein; Similar to PID:1001103 PID:1001123 percent identity: 35.54; identified by sequence similarity; putative. | Predicted coding region AF_1003; Hypothetical protein; identified by GeneMark; putative. | 0.553 |
AF_1002 | nadE | AF_1002 | AF_1000 | Conserved hypothetical protein; Similar to PID:1001103 PID:1001123 percent identity: 35.54; identified by sequence similarity; putative. | NH(3)-dependent NAD+ synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | 0.470 |
AF_1003 | AF_1001 | AF_1003 | AF_1001 | Predicted coding region AF_1003; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region AF_1001; Hypothetical protein; identified by GeneMark; putative. | 0.423 |
AF_1003 | AF_1002 | AF_1003 | AF_1002 | Predicted coding region AF_1003; Hypothetical protein; identified by GeneMark; putative. | Conserved hypothetical protein; Similar to PID:1001103 PID:1001123 percent identity: 35.54; identified by sequence similarity; putative. | 0.553 |
nadE | AF_0999 | AF_1000 | AF_0999 | NH(3)-dependent NAD+ synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Predicted coding region AF_0999; Hypothetical protein; identified by GeneMark; putative. | 0.773 |
nadE | AF_1001 | AF_1000 | AF_1001 | NH(3)-dependent NAD+ synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Predicted coding region AF_1001; Hypothetical protein; identified by GeneMark; putative. | 0.601 |
nadE | AF_1002 | AF_1000 | AF_1002 | NH(3)-dependent NAD+ synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source. | Conserved hypothetical protein; Similar to PID:1001103 PID:1001123 percent identity: 35.54; identified by sequence similarity; putative. | 0.470 |