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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1011Conserved hypothetical protein; Similar to SP:P53259 PID:1323155 percent identity: 35.92; identified by sequence similarity; putative. (330 aa)    
Predicted Functional Partners:
AF_1420
Membrane protein; Similar to GB:L77117 SP:Q58237 PID:1591514 percent identity: 51.83; identified by sequence similarity; putative.
  
 0.879
tatA
Conserved hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
 
 
 0.833
AF_0784
Predicted coding region AF_0784; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.809
AF_1012
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57970 PID:1591255 percent identity: 38.49; identified by sequence similarity; putative.
       0.773
AF_1010
Ferredoxin (fdx-6); Similar to SP:P00211 percent identity: 44.44; identified by sequence similarity; putative.
       0.738
AF_1009
Predicted coding region AF_1009; Hypothetical protein; identified by GeneMark; putative.
       0.644
AF_1784
Protoporphyrinogen oxidase (hemK); Putative protein methyltransferase using S-adenosyl-L- methionine as the methyl donor. May methylate a Gln residue in target proteins (By similarity); Belongs to the eukaryotic/archaeal PrmC-related family.
 
   
 0.533
AF_1968
Transcriptional regulatory protein, Rok family; Similar to PID:1208894 SP:Q44406 percent identity: 32.91; identified by sequence similarity; putative.
 
   
 0.493
AF_1395
Conserved hypothetical protein; Similar to GB:L77117 PID:1592047 percent identity: 45.41; identified by sequence similarity; putative; In the N-terminal section; belongs to the UPF0200 family.
 
   
 0.492
nfi
Conserved hypothetical protein; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. Recognizes only deoxyinosine.
 
     0.483
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.