Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1018ABC transporter, ATP-binding protein; Similar to GB:L77117 SP:Q58206 PID:1591493 percent identity: 57.71; identified by sequence similarity; putative. (228 aa)    
Predicted Functional Partners:
AF_1017
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58207 PID:1591494 percent identity: 37.84; identified by sequence similarity; putative.
 
 0.998
AF_1470
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58207 PID:1591494 percent identity: 36.61; identified by sequence similarity; putative.
 
 0.991
AF_1021
ABC transporter, ATP-binding protein; Similar to GB:L77117 PID:1499865 percent identity: 37.82; identified by sequence similarity; putative.
  
0.959
AF_0232
Glutamine ABC transporter, permease protein (glnP); Similar to SP:P10345 PID:41572 GB:U00096 PID:1651370 PID:1787030 percent identity: 39.25; identified by sequence similarity; putative.
 
  
 0.916
AF_1769
Dipeptide ABC transporter, permease protein (dppC); Similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964 percent identity: 40.84; identified by sequence similarity; putative.
 
  
 0.877
AF_1019
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58205 PID:1499617 percent identity: 23.74; identified by sequence similarity; putative.
  
    0.836
AF_1820
Predicted coding region AF_1820; Hypothetical protein; identified by GeneMark; putative.
 
 
 0.821
AF_1005
ABC transporter, ATP-binding protein, putative; Similar to SP:P37624 PID:912462 PID:2367231 percent identity: 26.69; identified by sequence similarity; putative.
    
 0.692
AF_1004
Predicted coding region AF_1004; Hypothetical protein; identified by GeneMark; putative.
  
    0.683
AF_1020
Predicted coding region AF_1020; Hypothetical protein; identified by GeneMark; putative.
       0.678
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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