STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1019Conserved hypothetical protein; Similar to GB:L77117 SP:Q58205 PID:1499617 percent identity: 23.74; identified by sequence similarity; putative. (459 aa)    
Predicted Functional Partners:
AF_1017
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58207 PID:1591494 percent identity: 37.84; identified by sequence similarity; putative.
  
    0.867
AF_1018
ABC transporter, ATP-binding protein; Similar to GB:L77117 SP:Q58206 PID:1591493 percent identity: 57.71; identified by sequence similarity; putative.
  
    0.865
AF_1020
Predicted coding region AF_1020; Hypothetical protein; identified by GeneMark; putative.
       0.678
AF_1021
ABC transporter, ATP-binding protein; Similar to GB:L77117 PID:1499865 percent identity: 37.82; identified by sequence similarity; putative.
       0.503
AF_0147
Conserved hypothetical transmembrane protein; Similar to GB:L77117 SP:Q58204 PID:1592308 percent identity: 38.55; identified by sequence similarity; putative.
       0.479
AF_0496
Conserved hypothetical transmembrane protein; Similar to GB:L77117 SP:Q58204 PID:1592308 percent identity: 37.35; identified by sequence similarity; putative.
       0.479
AF_0793
Conserved hypothetical transmembrane protein; Similar to GB:L77117 SP:Q58204 PID:1592308 percent identity: 32.06; identified by sequence similarity; putative.
       0.479
AF_1022
Molybdenum-pterin-binding protein (mopB); Similar to GB:L06254 SP:Q08386 PID:310278 percent identity: 39.33; identified by sequence similarity; putative.
       0.477
AF_1470
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58207 PID:1591494 percent identity: 36.61; identified by sequence similarity; putative.
  
    0.437
AF_1820
Predicted coding region AF_1820; Hypothetical protein; identified by GeneMark; putative.
  
    0.437
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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