close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1049Type II secretion system protein (gspE-4); Similar to GB:L77117 SP:Q58310 PID:1591575 percent identity: 46.48; identified by sequence similarity; putative. (628 aa)    
Predicted Functional Partners:
AF_1048
Conserved hypothetical protein; Similar to GB:L77117 PID:1591576 percent identity: 28.23; identified by sequence similarity; putative.
 
  
 0.976
AF_1050
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 29.44; identified by sequence similarity; putative.
 
  
 0.958
AF_1052
Predicted coding region AF_1052; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.836
AF_0658
Conserved hypothetical protein; Similar to GB:L77117 PID:1591923 percent identity: 24.75; identified by sequence similarity; putative.
 
  
 0.818
AF_0995
Conserved hypothetical protein; Similar to GB:L77117 PID:1591923 percent identity: 26.90; identified by sequence similarity; putative.
 
  
 0.773
AF_1046
Predicted coding region AF_1046; Hypothetical protein; identified by GeneMark; putative.
  
    0.773
AF_1051
Predicted coding region AF_1051; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.760
AF_1047
Predicted coding region AF_1047; Hypothetical protein; identified by GeneMark; putative.
       0.755
AF_1042
Chemotaxis response regulator (cheY); Similar to PID:940149 percent identity: 62.93; identified by sequence similarity; putative.
 
  
 0.692
AF_1039
Conserved hypothetical protein; Similar to GB:M20144 SP:P40403 PID:289302 GB:AL009126 percent identity: 26.56; identified by sequence similarity; putative.
 
    0.671
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.