Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AF_1052Predicted coding region AF_1052; Hypothetical protein; identified by GeneMark; putative. (162 aa)    
Predicted Functional Partners:
AF_1051
Predicted coding region AF_1051; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.992
AF_1048
Conserved hypothetical protein; Similar to GB:L77117 PID:1591576 percent identity: 28.23; identified by sequence similarity; putative.
  
  
 0.958
AF_1050
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 29.44; identified by sequence similarity; putative.
  
  
 0.944
AF_1053
Predicted coding region AF_1053; Hypothetical protein; identified by GeneMark; putative.
       0.860
AF_1049
Type II secretion system protein (gspE-4); Similar to GB:L77117 SP:Q58310 PID:1591575 percent identity: 46.48; identified by sequence similarity; putative.
  
  
 0.859
flaB1
Flagellin (flaB1-1); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.796
flaB2
Flagellin (flaB1-2); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
  
  
 0.796
AF_0338
Type II secretion system protein (gspE-1); Similar to GB:L77117 SP:Q58310 PID:1591575 percent identity: 38.51; identified by sequence similarity; putative.
  
  
 0.721
AF_0659
Type II secretion system protein (gspE-2); Similar to GB:L77117 SP:Q58310 PID:1591575 percent identity: 38.17; identified by sequence similarity; putative.
  
  
 0.721
AF_0996
Type II secretion system protein (gspE-3); Similar to GB:L77117 SP:Q58310 PID:1591575 percent identity: 41.71; identified by sequence similarity; putative.
  
  
 0.721
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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