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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1053Predicted coding region AF_1053; Hypothetical protein; identified by GeneMark; putative. (269 aa)    
Predicted Functional Partners:
AF_1051
Predicted coding region AF_1051; Hypothetical protein; identified by GeneMark; putative.
       0.780
AF_1052
Predicted coding region AF_1052; Hypothetical protein; identified by GeneMark; putative.
       0.780
AF_1050
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 29.44; identified by sequence similarity; putative.
       0.773
flaB1
Flagellin (flaB1-1); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
       0.700
flaB2
Flagellin (flaB1-2); Flagellin is the subunit protein which polymerizes to form the filaments of archaeal flagella.
       0.700
AF_1048
Conserved hypothetical protein; Similar to GB:L77117 PID:1591576 percent identity: 28.23; identified by sequence similarity; putative.
       0.639
AF_1049
Type II secretion system protein (gspE-4); Similar to GB:L77117 SP:Q58310 PID:1591575 percent identity: 46.48; identified by sequence similarity; putative.
       0.492
AF_1047
Predicted coding region AF_1047; Hypothetical protein; identified by GeneMark; putative.
       0.468
trmY
Conserved hypothetical protein; Specifically catalyzes the N1-methylation of pseudouridine at position 54 (Psi54) in tRNAs; Belongs to the methyltransferase superfamily. TrmY family.
       0.449
AF_1057
Cytochrome C-type biogenesis protein (ccdA); Similar to SP:P45706 PID:870925 PID:1405449 GB:AL009126 percent identity: 30.69; identified by sequence similarity; putative.
       0.449
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.