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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1064ABC transporter, ATP-binding protein, putative; Similar to PID:1653298 percent identity: 36.02; identified by sequence similarity; putative. (620 aa)    
Predicted Functional Partners:
AF_1063
Response regulator; Similar to PID:940149 percent identity: 36.28; identified by sequence similarity; putative.
 
     0.765
AF_2226
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57864 PID:1591124 percent identity: 47.67; identified by sequence similarity; putative.
  
     0.641
AF_0918
Pyruvate formate-lyase activating enzyme (act-2); Similar to GB:L77117 SP:Q58214 PID:1499627 percent identity: 42.65; identified by sequence similarity; putative.
 
  
 0.599
AF_1062
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57905 PID:1591185 percent identity: 57.76; identified by sequence similarity; putative.
 
     0.595
AF_1065
Conserved hypothetical protein; Similar to GP:1914184 percent identity: 31.71; identified by sequence similarity; putative.
       0.589
AF_2078
Predicted coding region AF_2078; Hypothetical protein; identified by GeneMark; putative.
  
     0.550
AF_1138
Predicted coding region AF_1138; Hypothetical protein; identified by GeneMark; putative.
  
     0.511
AF_1061
Conserved hypothetical protein; Similar to GB:L77117 PID:1591504 percent identity: 42.64; identified by sequence similarity; putative.
       0.488
mer
N5,N10-methylenetetrahydromethanopterin reductase (mer-1); Catalyzes the oxidation of methyl-H(4)MPT to methylene- H(4)MPT; Belongs to the mer family.
       0.442
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.