Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1069Pantothenate permease (panF-1); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 28.90; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (491 aa)    
Predicted Functional Partners:
AF_1205
Pantothenate permease (panF-2); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 24.77; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.684
AF_1070
Coenzyme F390 synthetase (ftsA-1); Similar to PID:1050923 GB:AE000666 percent identity: 30.24; identified by sequence similarity; putative.
       0.571
AF_1995
Sodium- and chloride-dependent transporter; Similar to GB:L77117 SP:Q58715 PID:1591959 percent identity: 52.49; identified by sequence similarity; putative; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.
 
  
 0.476
AF_0969
Proline permease (putP-2); Similar to SP:P07117 GB:L01132 GB:L01133 GB:L01150 GB:L01151 percent identity: 27.40; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
0.439
AF_0680
Glutamine ABC transporter, ATP-binding protein (glnQ); Similar to GB:M61017 SP:P27675 PID:142988 percent identity: 63.83; identified by sequence similarity; putative.
  
  
 0.427
AF_0142
Cytochrome C oxidase, subunit II, putative; Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 38.04; identified by sequence similarity; putative.
   
  
 0.424
AF_1071
Predicted coding region AF_1071; Hypothetical protein; identified by GeneMark; putative.
     
 0.416
AF_1546
Conserved hypothetical protein; Similar to SP:P11666 PID:41424 PID:882453 GB:U00096 PID:1789291 percent identity: 33.47; identified by sequence similarity; putative.
 
   
 0.403
AF_0971
Conserved hypothetical protein; Similar to GP:1794166 percent identity: 25.78; identified by sequence similarity; putative.
 
 
   0.400
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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