Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AF_1069 | AF_1070 | Pantothenate permease (panF-1); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 28.90; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Coenzyme F390 synthetase (ftsA-1); Similar to PID:1050923 GB:AE000666 percent identity: 30.24; identified by sequence similarity; putative. | 0.654 |
AF_1069 | AF_1071 | Pantothenate permease (panF-1); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 28.90; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | Predicted coding region AF_1071; Hypothetical protein; identified by GeneMark; putative. | 0.452 |
AF_1070 | AF_1069 | Coenzyme F390 synthetase (ftsA-1); Similar to PID:1050923 GB:AE000666 percent identity: 30.24; identified by sequence similarity; putative. | Pantothenate permease (panF-1); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 28.90; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.654 |
AF_1070 | AF_1071 | Coenzyme F390 synthetase (ftsA-1); Similar to PID:1050923 GB:AE000666 percent identity: 30.24; identified by sequence similarity; putative. | Predicted coding region AF_1071; Hypothetical protein; identified by GeneMark; putative. | 0.546 |
AF_1070 | AF_1672 | Coenzyme F390 synthetase (ftsA-1); Similar to PID:1050923 GB:AE000666 percent identity: 30.24; identified by sequence similarity; putative. | Acetolactate synthase, small subunit, putative; Similar to PID:1196508 SP:Q59499 percent identity: 29.69; identified by sequence similarity; putative. | 0.487 |
AF_1071 | AF_1069 | Predicted coding region AF_1071; Hypothetical protein; identified by GeneMark; putative. | Pantothenate permease (panF-1); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 28.90; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.452 |
AF_1071 | AF_1070 | Predicted coding region AF_1071; Hypothetical protein; identified by GeneMark; putative. | Coenzyme F390 synthetase (ftsA-1); Similar to PID:1050923 GB:AE000666 percent identity: 30.24; identified by sequence similarity; putative. | 0.546 |
AF_1672 | AF_1070 | Acetolactate synthase, small subunit, putative; Similar to PID:1196508 SP:Q59499 percent identity: 29.69; identified by sequence similarity; putative. | Coenzyme F390 synthetase (ftsA-1); Similar to PID:1050923 GB:AE000666 percent identity: 30.24; identified by sequence similarity; putative. | 0.487 |