STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1070Coenzyme F390 synthetase (ftsA-1); Similar to PID:1050923 GB:AE000666 percent identity: 30.24; identified by sequence similarity; putative. (413 aa)    
Predicted Functional Partners:
AF_1069
Pantothenate permease (panF-1); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 28.90; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
     
 0.654
AF_1071
Predicted coding region AF_1071; Hypothetical protein; identified by GeneMark; putative.
       0.546
AF_1672
Acetolactate synthase, small subunit, putative; Similar to PID:1196508 SP:Q59499 percent identity: 29.69; identified by sequence similarity; putative.
 
   0.487
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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