Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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AF_1104Conserved hypothetical protein; Metal-dependent phosphatase with probable damage-control functions (By similarity). Could hydrolyze oxidatively damaged purine nucleotides or their biosynthetic intermediates (By similarity). (288 aa)    
Predicted Functional Partners:
AF_1105
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58246 PID:1499662 percent identity: 49.25; identified by sequence similarity; putative.
       0.787
AF_1106
Conserved hypothetical protein; Probably involved in the biogenesis of the ribosome.
       0.773
purF
Amidophosphoribosyltransferase (purF); Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
     
 0.703
AF_1103
Predicted coding region AF_1103; Hypothetical protein; identified by GeneMark; putative.
       0.671
gyrB
DNA gyrase, subunit B (gyrB); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.
       0.618
AF_1102
Predicted coding region AF_1102; Hypothetical protein; identified by GeneMark; putative.
       0.585
AF_1733
Conserved hypothetical protein; Similar to GB:L77117 PID:1500444 percent identity: 40.91; identified by sequence similarity; putative.
       0.507
cdhA1
acetyl-CoA decarbonylase/synthase, subunit alpha (cdhA-1); Part of the ACDS complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase.
       0.506
cdhB1
acetyl-CoA decarbonylase/synthase, subunit epsilon (cdhB-1); Part of a complex that catalyzes the reversible cleavage of acetyl-CoA, allowing autotrophic growth from CO(2). The alpha-epsilon subcomponent functions as a carbon monoxide dehydrogenase. The precise role of the epsilon subunit is unclear; it may have a stabilizing role within the alpha(2)epsilon(2) component and/or be involved in electron transfer to FAD during a potential FAD-mediated CO oxidation. Belongs to the CdhB family.
       0.506
purM
Phosphoribosylformylglycinamidine cyclo-ligase (purM); Similar to GB:L77117 SP:Q57656 PID:1590946 percent identity: 53.77; identified by sequence similarity; putative.
       0.422
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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