Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1121Transcriptional regulatory protein, AsnC family; Similar to SP:P42180 percent identity: 35.79; identified by sequence similarity; putative. (155 aa)    
Predicted Functional Partners:
AF_1120
Predicted coding region AF_1120; Hypothetical protein; identified by GeneMark; putative.
     
 0.663
AF_1119
Predicted coding region AF_1119; Hypothetical protein; identified by GeneMark; putative.
       0.613
AF_1122
3-hydroxyacyl-CoA dehydrogenase (hbd-5); Similar to PID:1055222 SP:P52041 percent identity: 45.20; identified by sequence similarity; putative.
       0.511
AF_0651
Predicted coding region AF_0651; Hypothetical protein; identified by GeneMark; putative.
   
 
 0.458
AF_1404
Transcriptional regulatory protein, AsnC family; Similar to GB:L10328 SP:P03809 GB:K00826 PID:290592 PID:455179 percent identity: 45.10; identified by sequence similarity; putative.
   
 
 0.458
AF_1118
Predicted coding region AF_1118; Hypothetical protein; identified by GeneMark; putative.
       0.438
AF_1124
Conserved hypothetical protein; Similar to GP:1877374 percent identity: 31.43; identified by sequence similarity; putative.
  
    0.405
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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