Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_11223-hydroxyacyl-CoA dehydrogenase (hbd-5); Similar to PID:1055222 SP:P52041 percent identity: 45.20; identified by sequence similarity; putative. (650 aa)    
Predicted Functional Partners:
AF_0967
3-ketoacyl-CoA thiolase (acaB-9); Similar to GB:L77117 PID:1592180 percent identity: 33.67; identified by sequence similarity; putative.
 
 0.922
AF_0968
3-ketoacyl-CoA thiolase (acaB-10); Similar to GB:L77117 PID:1592180 percent identity: 27.98; identified by sequence similarity; putative.
 
 0.917
AF_0333
4-hydroxyphenylacetate-3-hydroxylase (hpaA-1); Similar to PID:974146 percent identity: 22.35; identified by sequence similarity; putative.
    
 0.910
AF_1027
4-hydroxyphenylacetate-3-hydroxylase (hpaA-3); Similar to PID:974146 percent identity: 21.03; identified by sequence similarity; putative.
    
 0.910
AF_0283
3-ketoacyl-CoA thiolase (acaB-7); Similar to GB:L77117 PID:1592180 percent identity: 41.99; identified by sequence similarity; putative.
  
 0.907
AF_2416
3-ketoacyl-CoA thiolase (acaB-12); Similar to GB:L77117 PID:1592180 percent identity: 49.87; identified by sequence similarity; putative.
  
 0.907
AF_0202
3-ketoacyl-CoA thiolase (acaB-6); Similar to GB:L77117 PID:1592180 percent identity: 33.51; identified by sequence similarity; putative.
  
 0.889
AF_1291
3-ketoacyl-CoA thiolase (acaB-11); Similar to GB:L77117 PID:1592180 percent identity: 40.10; identified by sequence similarity; putative.
  
 0.889
AF_1197
3-ketoacyl-CoA thiolase (fadA-2); Similar to GB:U08465 SP:P45359 PID:475715 percent identity: 57.95; identified by sequence similarity; putative.
  
 0.887
AF_0018
3-ketoacyl-CoA thiolase (acaB-1); Similar to GB:L77117 PID:1592180 percent identity: 41.02; identified by sequence similarity; putative.
  
 0.884
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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