Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AF_1140Predicted coding region AF_1140; Hypothetical protein; identified by GeneMark; putative. (439 aa)    
Predicted Functional Partners:
AF_1139
ABC transporter, ATP-binding protein; Similar to PID:1177253 SP:P55339 PID:2226115 GB:AL009126 percent identity: 38.18; identified by sequence similarity; putative.
       0.878
AF_1136
ABC transporter, ATP-binding protein; Similar to GB:L20573 SP:P42332 PID:437315 percent identity: 39.32; identified by sequence similarity; putative.
     
 0.731
AF_1137
Predicted coding region AF_1137; Hypothetical protein; identified by GeneMark; putative.
       0.565
AF_1138
Predicted coding region AF_1138; Hypothetical protein; identified by GeneMark; putative.
       0.565
AF_0414
Predicted coding region AF_0414; Hypothetical protein; identified by GeneMark; putative.
      
 0.408
AF_0417
Predicted coding region AF_0417; Hypothetical protein; identified by GeneMark; putative.
      
 0.408
AF_0506
Iron-sulfur binding reductase; Similar to GP:1890198 percent identity: 38.50; identified by sequence similarity; putative.
      
 0.408
AF_1360
Phosphate ABC transporter, regulatory protein (phoU); Plays a role in the regulation of phosphate uptake.
      
 0.408
AF_1752
Carbohydrate kinase, FGGY family; Similar to GB:M57384 SP:P21939 PID:149607 percent identity: 29.29; identified by sequence similarity; putative; Belongs to the FGGY kinase family.
      
 0.408
AF_0507
Conserved hypothetical protein; Similar to GP:1480329 percent identity: 32.26; identified by sequence similarity; putative.
      
 0.407
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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