Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AF_1148Transcriptional regulatory protein, AsnC family; Similar to GB:L77117 SP:Q57615 PID:1498922 percent identity: 32.62; identified by sequence similarity; putative. (149 aa)    
Predicted Functional Partners:
AF_0474
Transcriptional regulatory protein, AsnC family; Similar to SP:P42180 percent identity: 36.84; identified by sequence similarity; putative.
  
   
 0.697
AF_1723
Transcriptional regulatory protein, AsnC family; Similar to GB:L77117 SP:Q58133 PID:1591440 percent identity: 46.43; identified by sequence similarity; putative.
  
   
 0.669
AF_1149
Large helicase-related protein (lhr-1); Similar to GB:L77117 SP:Q57742 PID:1591016 percent identity: 34.46; identified by sequence similarity; putative.
 
 
   0.659
glnA
Glutamine synthetase (glnA); Probably involved in nitrogen metabolism via ammonium assimilation. Catalyzes the ATP-dependent biosynthesis of glutamine from glutamate and ammonia. Beta-glutamate is a much poorer substrate than alpha-glutamate; Belongs to the glutamine synthetase family.
     
 0.653
tyrS
tyrosyl-tRNA synthetase (tyrS); Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 3 subfamily.
  
    0.633
AF_1448
Transcriptional regulatory protein, AsnC family; Similar to GB:L77117 SP:Q58133 PID:1591440 percent identity: 30.58; identified by sequence similarity; putative.
  
   
 0.501
AF_0651
Predicted coding region AF_0651; Hypothetical protein; identified by GeneMark; putative.
   
 
 0.458
AF_1404
Transcriptional regulatory protein, AsnC family; Similar to GB:L10328 SP:P03809 GB:K00826 PID:290592 PID:455179 percent identity: 45.10; identified by sequence similarity; putative.
   
 
 0.458
AF_0111
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58629 PID:1591864 percent identity: 40.07; identified by sequence similarity; putative.
      
 0.440
AF_0115
Conserved hypothetical protein; Similar to GB:X52543 PID:46506 SP:P55177 percent identity: 31.85; identified by sequence similarity; putative.
 
     0.408
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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