Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AF_1180Predicted coding region AF_1180; Hypothetical protein; identified by GeneMark; putative. (434 aa)    
Predicted Functional Partners:
AF_1181
GTP-binding protein; Similar to GP:1732241 percent identity: 36.26; identified by sequence similarity; putative.
 
 
 0.906
mptA
Conserved hypothetical protein; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
 
     0.830
AF_0539
Conserved hypothetical protein; Similar to PID:662338 percent identity: 34.10; identified by sequence similarity; putative.
    
 0.670
AF_2209
Conserved hypothetical protein; Similar to SP:P46577 percent identity: 31.33; identified by sequence similarity; putative.
    
 0.670
AF_1182
Predicted coding region AF_1182; Hypothetical protein; identified by GeneMark; putative.
       0.655
AF_1183
Predicted coding region AF_1183; Hypothetical protein; identified by GeneMark; putative.
       0.629
AF_1160
H+-transporting ATP synthase, subunit K (atpK-1); Similar to GB:L77117 SP:Q57674 PID:1590959 percent identity: 46.27; identified by sequence similarity; putative.
 
  
 0.589
AF_1162
H+-transporting ATP synthase, subunit K (atpK-2); Similar to GB:L77117 SP:Q57674 PID:1590959 percent identity: 46.27; identified by sequence similarity; putative.
 
  
 0.589
AF_1178
Predicted coding region AF_1178; Hypothetical protein; identified by GeneMark; putative.
       0.589
glyA
Serine hydroxymethyltransferase (glyA); Catalyzes the reversible interconversion of serine and glycine with tetrahydromethanopterin (H4MPT) serving as the one-carbon carrier. Also exhibits a pteridine-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro- aldol mechanism; Belongs to the SHMT family.
    
 0.588
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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