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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1180Predicted coding region AF_1180; Hypothetical protein; identified by GeneMark; putative. (434 aa)    
Predicted Functional Partners:
AF_1181
GTP-binding protein; Similar to GP:1732241 percent identity: 36.26; identified by sequence similarity; putative.
 
 
 0.921
mptA
Conserved hypothetical protein; Converts GTP to 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate, the first intermediate in the biosynthesis of coenzyme methanopterin.
 
     0.836
iscU1
nifU protein (nifU-1); A scaffold on which IscS assembles Fe-S clusters. Subsequently gives the nascent cluster to other proteins. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters (By similarity). Belongs to the NifU family.
   
 
 0.785
AF_0565
nifU protein (nifU-2); Similar to GB:L42023 PID:1003638 PID:1222302 PID:1204625 PID:1573346 percent identity: 55.65; identified by sequence similarity; putative.
   
 
 0.785
AF_0539
Conserved hypothetical protein; Similar to PID:662338 percent identity: 34.10; identified by sequence similarity; putative.
   
 0.721
AF_2209
Conserved hypothetical protein; Similar to SP:P46577 percent identity: 31.33; identified by sequence similarity; putative.
   
 0.721
AF_0578
Aminopeptidase, putative; Similar to GB:X73124 SP:P25152 GB:X52480 PID:40243 PID:413932 percent identity: 27.76; identified by sequence similarity; putative.
    
 0.704
AF_1182
Predicted coding region AF_1182; Hypothetical protein; identified by GeneMark; putative.
       0.655
AF_1183
Predicted coding region AF_1183; Hypothetical protein; identified by GeneMark; putative.
       0.629
AF_1184
Signal-transducing histidine kinase; Similar to SP:P10955 GB:J03174 PID:152215 PID:49404 percent identity: 29.81; identified by sequence similarity; putative.
   
 
 0.613
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.