STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1189Predicted coding region AF_1189; Hypothetical protein; identified by GeneMark; putative. (63 aa)    
Predicted Functional Partners:
AF_1187
Predicted coding region AF_1187; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_1188
Conserved hypothetical protein; Similar to GP:1788023 percent identity: 29.56; identified by sequence similarity; putative.
       0.773
AF_1185
Iron-sulfur cluster binding protein; Similar to GB:L77117 SP:Q57563 PID:1590877 percent identity: 36.67; identified by sequence similarity; putative.
       0.486
AF_1186
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57564 PID:1498865 percent identity: 56.43; identified by sequence similarity; putative.
       0.486
AF_1190
3-hydroxyacyl-CoA dehydrogenase (hbd-7); Similar to PID:1055222 SP:P52041 percent identity: 46.45; identified by sequence similarity; putative.
       0.411
menB
Dihydroxynaphthoic acid synthase (menB); Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
       0.411
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.