Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1210Conserved hypothetical protein; Similar to GP:1654020 percent identity: 34.56; identified by sequence similarity; putative. (313 aa)    
Predicted Functional Partners:
AF_1200
Conserved hypothetical protein; Similar to GP:1654018 percent identity: 61.01; identified by sequence similarity; putative.
 
  
 0.840
AF_1206
3-hydroxyacyl-CoA dehydrogenase (hbd-8); Similar to PID:1055222 SP:P52041 percent identity: 35.91; identified by sequence similarity; putative.
 
  
 0.784
AF_1209
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58896 PID:1500389 percent identity: 42.79; identified by sequence similarity; putative.
       0.737
AF_1211
Conserved hypothetical protein; Catalyzes the reversible formation of acetate and ATP from acetyl-CoA by using ADP and phosphate. Can use other substrates such as propionyl-CoA and butyryl-CoA, but not phenylacetyl-CoA. Seems to be involved primarily in the conversion of acetyl-CoA to acetate. Participates in the degradation of branched-chain amino acids via branched-chain-acyl-CoA esters; In the C-terminal section; belongs to the acetate CoA ligase beta subunit family.
       0.572
AF_1207
2-deoxy-D-gluconate 3-dehydrogenase (kduD); Similar to SP:Q05528 GB:X62073 PID:48986 percent identity: 45.31; identified by sequence similarity; putative.
  
  
 0.553
AF_1212
Conserved hypothetical protein; Similar to PID:1001350 PID:1001314 percent identity: 32.18; identified by sequence similarity; putative; To Synechocystis PCC 6803 slr0039.
       0.546
AF_1213
Predicted coding region AF_1213; Hypothetical protein; identified by GeneMark; putative.
       0.541
AF_1208
Conserved hypothetical protein; Similar to GP:1654019 percent identity: 39.81; identified by sequence similarity; putative.
       0.446
AF_1199
Glutaconate CoA-transferase, subunit A (gctA); Similar to PID:559392 percent identity: 31.86; identified by sequence similarity; putative; Belongs to the 3-oxoacid CoA-transferase subunit A family.
 
   
 0.427
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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