Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ubiXPhenylacrylic acid decarboxylase (pad1); Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family. (182 aa)    
Predicted Functional Partners:
AF_0209
Conserved hypothetical protein; Similar to SP:P26615 GB:M87049 GB:X65013 PID:148243 percent identity: 42.53; identified by sequence similarity; putative; Belongs to the UbiD family.
 
 0.990
AF_1643
Conserved hypothetical protein; Similar to GB:L77117 PID:1499986 percent identity: 43.00; identified by sequence similarity; putative; Belongs to the UbiD family.
 
 
 0.990
AF_2176
4-hydroxybenzoate octaprenyltransferase (ubiA); Similar to GP:1813467 percent identity: 41.61; identified by sequence similarity; putative.
    
 0.918
AF_2288
Acetylglutamate kinase, putative; Catalyzes the formation of isopentenyl diphosphate (IPP), the building block of all isoprenoids.
    
  0.906
thiM
Hydroxyethylthiazole kinase (thiM); Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.
    
  0.901
trpCD
Anthranilate synthase component II (trpD); Bifunctional enzyme that catalyzes the second and fourth steps of tryptophan biosynthetic pathway. The second step is catalyzed by the anthranilate phosphoribosyltransferase, coded by the TrpD domain and the fourth step is catalyzed by indole-3-glycerol phosphate synthase, coded by the TrpC domain (By similarity).
     
 0.826
cetZ
Cell division protein, putative; Involved in cell shape control; Belongs to the CetZ family.
       0.785
AF_2333
Conserved hypothetical protein; Similar to GB:L77117 PID:1591952 percent identity: 45.50; identified by sequence similarity; putative.
 
     0.667
AF_1423
Conserved hypothetical protein; Similar to GP:1561567 percent identity: 36.39; identified by sequence similarity; putative.
  
    0.642
AF_1988
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57692 PID:1499018 percent identity: 42.77; identified by sequence similarity; putative.
       0.624
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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