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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cetZCell division protein, putative; Involved in cell shape control; Belongs to the CetZ family. (394 aa)    
Predicted Functional Partners:
AF_0782
Predicted coding region AF_0782; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.959
ubiX
Phenylacrylic acid decarboxylase (pad1); Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
       0.789
AF_2021
Rod shape-determining protein (mreB); Similar to GB:D37799 SP:P39763 PID:520840 PID:1377825 GB:AL009126 percent identity: 26.60; identified by sequence similarity; putative.
  
 
 0.761
uppS
Conserved hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
  
  
 0.635
hisS
histidyl-tRNA synthetase (hisS); Similar to GB:L77117 SP:Q58406 PID:1591660 percent identity: 45.97; identified by sequence similarity; putative; Belongs to the class-II aminoacyl-tRNA synthetase family.
 
  
 0.620
AF_1217
Conserved hypothetical protein; Similar to GB:L77117 SP:Q60332 PID:1498780 percent identity: 39.94; identified by sequence similarity; putative.
 
     0.610
prf1
Peptide chain release factor eRF, subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
 
     0.610
cofC
Conserved hypothetical protein; Guanylyltransferase that catalyzes the activation of phosphoenolpyruvate (PEP) as enolpyruvoyl-2-diphospho-5'-guanosine, via the condensation of PEP with GTP. It is involved in the biosynthesis of coenzyme F420, a hydride carrier cofactor; Belongs to the CofC family.
 
     0.590
AF_1817
Transcriptional regulatory protein, TetR family; Similar to PID:868019 GB:U00096 SP:Q59431 PID:1742672 PID:1742680 percent identity: 24.55; identified by sequence similarity; putative.
 
 
 
 0.580
AF_1259
Inosine monophosphate dehydrogenase, putative; Similar to GB:L77117 SP:Q57647 PID:1498962 percent identity: 51.61; identified by sequence similarity; putative.
 
 
 0.579
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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